PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_04618-P1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 312aa    MW: 34746.3 Da    PI: 6.6482
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_04618-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH18.63.4e-06112187554
                      HHHHHHHHHHHHHHHHHHHHCTSCCC.............................TTS-STCHHHHHHHHHHHHHH CS
              HLH   5 hnerErrRRdriNsafeeLrellPkas..........................kapskKlsKaeiLekAveYIksL 54 
                      h +rEr+RR+++ ++++ L  ++ ++s                          +      +K +i++ A  YI++L
  TRIUR3_04618-P1 112 HMMRERQRREKLSQSYADLHAMVSSRSkvlrpsapavlphsislvlechvlneRVMPLQQDKNSIVQSAAVYIHEL 187
                      889**********************888999999999999999999999997633333368888999999999988 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474596.54E-9107135IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS508889.94107187IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.108.8E-9111205IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.30E-4111192No hitNo description
SuperFamilySSF474596.54E-9167208IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009414Biological Processresponse to water deprivation
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    Send to blast
MQMDSYYFHD DAHFFAGCGV PGSPDLPFAD LIASLWEPLP EVASQSACRQ YRGVGLELPG  60
TARGGTGNGI NIHRRMMDVL GRMGPATEEE ERPQHQQQQA AGAVESSRGF RHMMRERQRR  120
EKLSQSYADL HAMVSSRSKV LRPSAPAVLP HSISLVLECH VLNERVMPLQ QDKNSIVQSA  180
AVYIHELKVA KEQLQRRNDE LKAKILGHDA QQQCVKVQFE VDEPSSSIDS MIGALTRLKS  240
MNVKTRGIHS ILSGQRLTTE MNVETTIAAC EVEKAVEEAL QEVERNQLPD SEAPFPGSRS  300
AWPQTSHVQN VF
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3659030.0AK365903.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2038M22.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014752663.11e-117PREDICTED: transcription factor bHLH78
SwissprotQ75KV91e-110BH148_ORYSJ; Transcription factor BHLH148
TrEMBLM7ZKN80.0M7ZKN8_TRIUA; Transcription factor bHLH92
STRINGMLOC_74977.51e-130(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP59403450
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43650.19e-20bHLH family protein